Titlebook: Natural Computing; 2nd International Wo Y. Suzuki,M. Hagiya,A. Adamatzky Conference proceedings 2009 Springer-Verlag Tokyo 2009 Alignment.A

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Endearing

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Intrepid

An Efficient Multiple Alignment Method for RNA Secondary Structures Including Pseudoknotsthem. Tree adjoining grammars have proved to be promising for this problem but the question of how to make TAG-based applications practical enough to analyze RNAs of thousands nucleotides remains open. This paper addresses this problem. It makes use of biological properties of pseudoknots, the . and

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Asymmetric Interaction in Non-equilibrium Dissipative System towards Dynamics for Biological Systemon. A minimal model formulated with Newtonian equation of particles in such a system is presented and analyzed mathematically and numerically. Through the investigations of models, we show general properties in such systems.

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Design and Numerical Analysis of RNA Oscillatorfor nanotechnology. Here, we propose an oscillator as a nanosystem to control the nanomachines. It was modeled after a circadian rhythm in life systems and utilized DNA/RNA and their molecular reactions. The molecular reactions were composed of nucleic-acid hybridization, RNA transcription, DNA exte

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