Titlebook: Introduction to Modeling for Biosciences; David J. Barnes,Dominique Chu Textbook 20101st edition Springer-Verlag London Limited 2010 Agent

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Other Stochastic Methods and Prism,. The second part of this chapter describes PRISM, which is a powerful computational tool for formulating, analyzing and simulating Markov-chain models. Throughout the chapter, concepts are illustrated using biologically-motivated case studies.

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ABMs Using Repast and Java,s of agent-based models from an earlier chapter, we look in detail at how to build models via either flowcharts or Java code. We illustrate some of the ways in which a toolkit such as Repast considerably simplifies the life of the modeler by providing extensive support for model visualization, charting of results, and multiple runs, for instance.

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Foundations of Modeling,This introductory chapter discusses some basic principles of biological modeling. Specifically, it presents some practical advice on how to approach modeling problems in biology. This chapter sets the scene for the rest of the book, and is particularly intended for the scientist who has little previous experience in modeling.

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David J. Barnes,Dominique ChuPresents a broad overview of the most important techniques used to model biological systems.Provides a detailed introduction to agent-based models, stochastic modelling techniques and differential equ

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APEX

978-1-4471-5907-0Springer-Verlag London Limited 2010