Titlebook: Diagnostic Bacteriology Protocols; Louise O’Connor Book 2006Latest edition Humana Press 2006 DNA.Escherichia coli.Microarray.PCR.Single Nu

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Detection of ,, and , in Blood and Cerebrospinal Fluid Using Fluorescence-Based PCR,ye. The method has the advantage that DNA extraction, liquid handling, PCR, and analysis also can be fully automated. In this chapter, the simultaneous detection of ., and . from clinical samples is described.

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,Use of Hybridization Probes in a Real-Time PCR Assay on the LightCycler? for the Detection of Methi-time polymerase chain reaction is described. This method is an attractive alternative to labor-intensive manual protocols and can easily be incorporated into the diagnostic microbiology laboratory workflow, with the ability to obtain results within 4 h.

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Overview of DNA Purification for Nucleic Acid-Based Diagnostics From Environmental and Clinical Samlinical samples. The issues of sampling, sample preservation, separation of the microorganisms from the environmental or clinical matrix, and DNA purification are covered. This chapter will focus on the advantages and the disadvantages of the methods available.

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Detection of Verotoxin Genes , and , in , O157:H7 in Minced Beef Using Immunocapture and Real-Time lowed by immunomagnetic separation and extraction of deoxyribonucleic acid. Real-time polymearse chain reaction, using hybridization probes, is used to detect the verotoxin genes 1 and 2 found in . O157:H7. The assay has a detection limit of log. 3.5/mL . O157:H7 cells in minced beef.

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Alexzander A. A. Asea,Punit Kaurgene opens a door to potential nonamplified direct detection technologies. In this chapter, a method is described to accurately quantify specific RNA transcripts and thus determine their potential utility as “high-copy” targets. The quantification method described also has application in gene-expression analysis.

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Anjali Ramaswamy,Ping Wei,Fan Panleotide fingerprints), is based on high levels of polymorphism observed at several genomic loci in the . genomes that contain small tandemly repeated deoxyribonucleic sequences. The technique described is designed for medium- to high-throughput analyses. However, the method described can be modified to characterize fewer samples.