Titlebook: Computational Methods in Systems Biology; 20th International C Ion Petre,Andrei P?un Conference proceedings 2022 The Editor(s) (if applicab

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https://doi.org/10.1007/978-3-540-71593-1e function of the concentration values of their input species, whatever changes are operated on the inputs during the computation. We prove that the set of real functions stabilized by a CRN with mass action law kinetics is precisely the set of real algebraic functions.

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978-3-031-15033-3The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Switzerl

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Lecture Notes in Computer Sciencehttp://image.papertrans.cn/c/image/232797.jpg

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Computational Methods in Systems Biology978-3-031-15034-0Series ISSN 0302-9743 Series E-ISSN 1611-3349

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https://doi.org/10.1007/978-3-540-71593-1n a finite set of molecular species, possibly restricted to elementary reactions, i.e.?with at most two reactants and mass action law kinetics. In this paper, we introduce a notion of online analog computation for the CRNs that stabilize the concentration of their output species to the result of som

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Implementing Microsoft Dynamicsong runs are not simulated as a whole but assembled from shorter precomputed segments of simulation runs. On the one hand, this speeds up the simulation process to obtain multiple runs since we can reuse the segments. On the other hand, questions on diversity and genuineness of our runs arise. Howev

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Implementing Microsoft Dynamicsto mass-action reaction networks with separated timescales, uses solutions of the . as proxies for symbolic states. The partial tropical equilibration solutions are found algorithmically. These solutions also provide the scaling needed for slow-fast decomposition and model reduction. Any trace of th