Titlebook: Computational Methods in Systems Biology; International Confer Muffy Calder,Stephen Gilmore Conference proceedings 2007 Springer-Verlag Ber

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Diverticulitis

Simultaneous Stochastic Simulation of Multiple Perturbations in Biological Network Models, inaccurate or perturbed. An important topic is thus the sensitivity of analysis results to parameter perturbations. This investigates how seriously potential parameter perturbations affect the analysis results and to which parameters the results are most sensitive. In this paper, a stochastic simul

NICHE

Asperity

On the Analysis of Numerical Data Time Series in Temporal Logic, automatically verify their satisfaction in both qualitative and quantitative models. In this paper, we propose a finite time horizon model-checking algorithm for the existential fragment of LTL with numerical constraints over the reals, with the ability to compute the range of values of the real va

諂媚于人

Context Sensitivity in Logical Modeling with Time Delays,automata can be very helpful. The formalism focussed on in this paper starts from the logical description developed by R. Thomas to capture network structure and qualitative behavior of a system. Using the framework of timed automata, the analysis of the dynamics can be refined by adding a continuou

CLASP

Stochastic Simulation of Biological Systems with Dynamical Compartment Structure,led by means of concurrent calculi. While the faithful modelling of bio-systems often requires multi-compartment semantics, the original Gillespie algorithm considers only one fixed-size volume. In this paper we introduce an extended formalisation of the above algorithm which preserves the original

CLASP

MORT

失望未來(lái)

Reconstruction of Mammalian Cell Cycle Regulatory Network from Microarray Data Using Stochastic Logding the computation of the Markov model parameters is able to reconstruct the topology of the SLN model in polynomial time instead of exponential as in previous study [29]. To test the performance of the method, we apply it to different datasets (both synthetic and experimental) covering the expres

fatuity

An Automated Translation from a Narrative Language for Biological Modelling into Process Algebra,ily usable by life scientists in modelling intra-cellular systems. Secondly, we provide an automatic translation of the proposed language into Beta-binders, a bio-inspired process calculus, which allows life scientists to formally analyse and simulate their models. We use the Gp130 signalling pathwa