Titlebook: Comparative Genomics; Methods and Protocol Jo?o C. Setubal,Jens Stoye,Peter F. Stadler Book 2018 Springer Science+Business Media LLC 2018 O

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Comparative Genomics for Prokaryotes,yotic genomes. In this chapter, we provide an overview of genome comparison tools that have been developed primarily (sometimes exclusively) for prokaryotic genomes. We cover methods that use only the DNA sequences, methods that use only the gene content, and methods that use both data types.

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https://doi.org/10.1007/978-3-322-88945-4yotic genomes. In this chapter, we provide an overview of genome comparison tools that have been developed primarily (sometimes exclusively) for prokaryotic genomes. We cover methods that use only the DNA sequences, methods that use only the gene content, and methods that use both data types.

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,Personalkapazit?t der Sozialwissenschaften,es tree reconstruction while also addressing common pitfalls, providing references to relevant computer programs. A practical phylogenomic analysis example including bacterial genomes is presented at the end of the chapter.

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bacteria

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Sozialwissenschaftliche Forschung und Praxisw of practical considerations intended for researchers who need to determine orthologous genes from a collection of annotated genomes, briefly describing some of the most popular programs and resources currently available for this task.

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Wissenssoziologische Hermeneutik prior knowledge of evolutionary relationships between the genes across the studied genomes. Moreover, the tool features a complete workflow for genome comparison, requiring nothing but annotated genome sequences as input.

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Gene Phylogenies and Orthologous Groups,w of practical considerations intended for researchers who need to determine orthologous genes from a collection of annotated genomes, briefly describing some of the most popular programs and resources currently available for this task.