Titlebook: Approaches in Integrative Bioinformatics; Towards the Virtual Ming Chen,Ralf Hofest?dt Book 2014 Springer-Verlag Berlin Heidelberg 2014 Bi

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Methodische und methodologische Reflexion, such as transcription and splicing, the production of a variety of transcripts, and the involvement of protein–nucleic acid composites such as chromatin. We seek to shed light on common themes that are beginning to develop in these rapidly evolving, but intimately related, fields.

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https://doi.org/10.1007/978-3-322-91326-5 sequential computer and require scalable parallel approaches. In this chapter, we describe network inference methods based on information theory and show a parallel algorithm that enables whole-genome networks reconstruction.

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https://doi.org/10.1007/978-3-658-14454-8iomarker discovery with particular focus on genomics and proteomics data. One case study is exemplarily presented, and relevant computational biomarker discovery terminology and techniques are explained.

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An Overview of Gene Regulation such as transcription and splicing, the production of a variety of transcripts, and the involvement of protein–nucleic acid composites such as chromatin. We seek to shed light on common themes that are beginning to develop in these rapidly evolving, but intimately related, fields.

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Petri Nets for Modeling and Analyzing Biochemical Reaction Networksntary ways. We describe the use of the framework to investigate biochemical reaction networks with the help of the unifying Petri net tool, Snoopy, and its close friends Charlie and Marcie. The repressilator example serves as running case study.

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Parallel Computing for Gene Networks Reverse Engineering sequential computer and require scalable parallel approaches. In this chapter, we describe network inference methods based on information theory and show a parallel algorithm that enables whole-genome networks reconstruction.

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An Overview of Gene Regulationtypes of RNA involved in a given response or process. Such a range of data will be necessary to unravel the complexities of the multiple layers involved in the regulation of gene expression..In this article we discuss a broad range of studies about gene regulation. These involve studies of processes