標(biāo)題: Titlebook: Comparative Genomics; 15th International W Joao Meidanis,Luay Nakhleh Conference proceedings 2017 Springer International Publishing AG 2017 [打印本頁] 作者: 烏鴉 時(shí)間: 2025-3-21 17:16
書目名稱Comparative Genomics影響因子(影響力)
書目名稱Comparative Genomics影響因子(影響力)學(xué)科排名
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度
書目名稱Comparative Genomics網(wǎng)絡(luò)公開度學(xué)科排名
書目名稱Comparative Genomics被引頻次
書目名稱Comparative Genomics被引頻次學(xué)科排名
書目名稱Comparative Genomics年度引用
書目名稱Comparative Genomics年度引用學(xué)科排名
書目名稱Comparative Genomics讀者反饋
書目名稱Comparative Genomics讀者反饋學(xué)科排名
作者: 字的誤用 時(shí)間: 2025-3-21 21:55
Signal Transduction Immunohistochemistryropose the first solution to the genomic duplication problem in which every reconciliation with the minimal number of single gene duplications is allowed and the method of clustering called minimum episodes under the assumption that input gene trees are unrooted. We also present an evaluation study of proposed algorithms on empirical datasets.作者: heart-murmur 時(shí)間: 2025-3-22 03:01 作者: FLEET 時(shí)間: 2025-3-22 07:15 作者: 領(lǐng)導(dǎo)權(quán) 時(shí)間: 2025-3-22 09:43
https://doi.org/10.1007/978-1-61779-024-9es in input trees. ASTRAL-III enables us to test whether contracting low support branches in gene trees improves the accuracy by reducing noise. In extensive simulations and on real data, we show that removing branches with . low support improves accuracy while overly aggressive filtering is harmful.作者: 采納 時(shí)間: 2025-3-22 16:44
Mohammed Shahid,C. David Nicholsoning formulations for the aforementioned problems. We further obtain such formulations for the restricted versions of the median and halving problems, which have been recently introduced for improving biological relevance.作者: 采納 時(shí)間: 2025-3-22 18:55
John K. Westwick,Jane E. Lamerdin) counting the number of optimal trees, (2) calculating consensus trees, (3) generating a random optimal tree, and (4) annotating branches in a given optimal tree by the proportion of optimal trees it appears in. SIESTA is available in open source form on github at ..作者: Tractable 時(shí)間: 2025-3-22 23:30 作者: Perennial長期的 時(shí)間: 2025-3-23 05:17 作者: 音樂學(xué)者 時(shí)間: 2025-3-23 07:15 作者: Communal 時(shí)間: 2025-3-23 13:27
Enhancing Searches for Optimal Trees Using SIESTA,) counting the number of optimal trees, (2) calculating consensus trees, (3) generating a random optimal tree, and (4) annotating branches in a given optimal tree by the proportion of optimal trees it appears in. SIESTA is available in open source form on github at ..作者: excrete 時(shí)間: 2025-3-23 16:39
Algorithms for Computing the Family-Free Genomic Similarity Under DCJ,heuristics, with computational experiments comparing their results to the ILP. Experiments on simulated datasets show that the proposed heuristics are very fast and even competitive with respect to the ILP algorithm for some instances.作者: Entrancing 時(shí)間: 2025-3-23 18:03 作者: COLIC 時(shí)間: 2025-3-24 01:01 作者: Bombast 時(shí)間: 2025-3-24 05:01 作者: senile-dementia 時(shí)間: 2025-3-24 10:32 作者: Eructation 時(shí)間: 2025-3-24 14:40 作者: 半球 時(shí)間: 2025-3-24 17:51 作者: 撫慰 時(shí)間: 2025-3-24 22:51 作者: 生來 時(shí)間: 2025-3-25 02:21
Rearrangement Scenarios Guided by Chromatin Structure,. To accomplish this we show that the quality of a clustering of the adjacencies based on Hi-C data is directly correlated to the quality of a rearrangement scenario that we compute between . and .. We evaluate a simple greedy strategy to choose the next rearrangement based on Hi-C, and motivate the study of the solution space of ..作者: seruting 時(shí)間: 2025-3-25 06:18 作者: opportune 時(shí)間: 2025-3-25 11:28 作者: intelligible 時(shí)間: 2025-3-25 15:12
Analysis of GPCR/Ion Channel InteractionsS and every gene tree has the full set of species. Here we address statistical consistency of coalescent-based species tree estimation methods when gene trees are missing species, i.e., in the presence of missing data.作者: 不真 時(shí)間: 2025-3-25 18:51 作者: 樹木中 時(shí)間: 2025-3-25 22:35
,Autoradiography of β1-and β2-Adrenoceptors,equencing reads, long reads, or homologous relations). We formalize this problem within the earlier introduced framework for comparative analysis and merging of scaffold assemblies (.). We prove that this problem is .-hard, and further present a polynomial-time algorithm for solving its special case作者: Ambulatory 時(shí)間: 2025-3-26 00:43 作者: Ccu106 時(shí)間: 2025-3-26 07:31 作者: alcoholism 時(shí)間: 2025-3-26 12:01 作者: Tonometry 時(shí)間: 2025-3-26 13:49 作者: 確定 時(shí)間: 2025-3-26 18:32 作者: tariff 時(shí)間: 2025-3-26 23:36
Finding Teams in Graphs and Its Application to Spatial Gene Cluster Discovery,two or more undirected weighted graphs such that the largest link in the cluster does not exceed a given threshold . in any input graph..We apply our model to human and mouse data to find ., i.e., gene sets with functional associations that exhibit close neighborhood in the spatial conformation of t作者: 畢業(yè)典禮 時(shí)間: 2025-3-27 05:10 作者: Flavouring 時(shí)間: 2025-3-27 08:45 作者: 有其法作用 時(shí)間: 2025-3-27 12:19
Comparative Genomics978-3-319-67979-2Series ISSN 0302-9743 Series E-ISSN 1611-3349 作者: Progesterone 時(shí)間: 2025-3-27 15:12
Conference proceedings 2017This book constitutes the proceedings of the 15th International Workshop Comparative Genomics, RECOMB-CG 2017, held in Barcelona, Spain, in October 2017. The 16 full papers presented were carefully reviewed and selected from 32 submissions. The papers report original research in all areas of Comparative Genomics.作者: 燒烤 時(shí)間: 2025-3-27 18:38
https://doi.org/10.1007/978-3-319-67979-2genome evolution; genome rearrangements; genome variation, diversity and dynamics; phylogenomics; compar作者: 厭倦嗎你 時(shí)間: 2025-3-27 23:38 作者: evaculate 時(shí)間: 2025-3-28 02:51 作者: 無王時(shí)期, 時(shí)間: 2025-3-28 06:31 作者: Pageant 時(shí)間: 2025-3-28 11:31
Daniel Ciznadija,Afsar Barlas,Katia Manovaan ancestral genome to a descendant genome where orthology relations between ancestral genes and their descendant are known. Our model includes two duplication mechanisms: single-gene tandem duplication and creation of single-gene circular chromosomes. We prove that in this model, computing the dist作者: 組成 時(shí)間: 2025-3-28 15:37 作者: Progesterone 時(shí)間: 2025-3-28 19:06 作者: 使聲音降低 時(shí)間: 2025-3-29 01:13 作者: macrophage 時(shí)間: 2025-3-29 06:59
Signal Transduction Immunohistochemistryevents can be reconstructed by clustering single gene duplications that are inferred by reconciling a set of gene trees with a species tree. Here we propose the first solution to the genomic duplication problem in which every reconciliation with the minimal number of single gene duplications is allo作者: Foreknowledge 時(shí)間: 2025-3-29 07:30
https://doi.org/10.1007/978-1-4615-2015-3ct taxa that artificially inflate the tree diameter. We formulate an optimization problem that seeks to find . leaves that can be removed to reduce the tree diameter maximally. We present a polynomial time solution to this “.-shrink” problem. Given this solution, we then use non-parametric statistic作者: CHOKE 時(shí)間: 2025-3-29 13:35
Making Protein Immunoprecipitates,s, it is often the case that the parsimony principal alone does not impose enough constraints. In this paper we make an initial effort towards computing scenarios that respect chromosome conformation, by using Hi-C data to guide our computations. We confirm the validity of a model – along with optim作者: municipality 時(shí)間: 2025-3-29 19:13 作者: 泰然自若 時(shí)間: 2025-3-29 23:45
,Autoradiography of β1-and β2-Adrenoceptors,mes consist of a large number of genomic fragments (.), whose order and/or orientation (i.e., strand) in the genome are unknown. There exist various scaffold assembly methods, which attempt to determine the order and orientation of scaffolds along the genome chromosomes. Some of these methods (e.g.,作者: 娘娘腔 時(shí)間: 2025-3-29 23:52 作者: 衍生 時(shí)間: 2025-3-30 07:39 作者: diathermy 時(shí)間: 2025-3-30 11:44
John K. Westwick,Jane E. Lamerdin NP-hard optimization criterion. A recent approach to computing large trees has been to constrain the search space by defining a set of “allowed bipartitions”, and then use dynamic programming to find provably optimal solutions in polynomial time. Several phylogenomic estimation methods, such as AST作者: 天文臺(tái) 時(shí)間: 2025-3-30 12:33
Analysis of GPCR/Ion Channel Interactionsently unknown. In this formulation, each genome is represented as a permutation on . elements that is the product of disjoint cycles of length 1 (.) and length 2 (.). The permutations are converted into their matrix representation, and the . . is used to define the median..In their paper, the author作者: OTTER 時(shí)間: 2025-3-30 17:30 作者: 管理員 時(shí)間: 2025-3-30 21:33
Signal Transduction and Bacterial Virulencereduce uncertainty takes the topology of the species tree into account. Under a maximum parsimony model, the best resolution of the weak branches is the binary tree that minimizes the cost of duplications, transfers, and losses. However, this problem is NP-hard, and the exact algorithm is limited to作者: excrete 時(shí)間: 2025-3-31 03:04
Joao Meidanis,Luay NakhlehIncludes supplementary material: 作者: 進(jìn)取心 時(shí)間: 2025-3-31 07:55 作者: 職業(yè) 時(shí)間: 2025-3-31 11:09
The Similarity Distribution of Paralogous Gene Pairs Created by Recurrent Alternation of Polyploiding whole genome doubling (WGD), motivated by the evolution of plants over many tens of millions of years, with their repeated cycles of genome doubling and fractionation. We focus on the frequency distribution of similarities between the two genes, over all the duplicate pairs in the genome. Our mod作者: 有毛就脫毛 時(shí)間: 2025-3-31 16:22 作者: 烤架 時(shí)間: 2025-3-31 21:32 作者: Synapse 時(shí)間: 2025-4-1 01:38
ASTRAL-III: Increased Scalability and Impacts of Contracting Low Support Branches,given gene trees while accounting for incomplete lineage sorting. It finds the tree that shares the maximum number of quartets with input trees, drawing bipartitions from a predefined set of bipartitions .. In this paper, we introduce ASTRAL-III, which substantially improves on ASTRAL-II in terms of
